ZINC ION

B8YB55 — DNA-directed RNA polymerase subunit Rpo2

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand ZN

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand ZN

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
B8YB55	n/a	2waq	ZN	B	1500	e2waqB1	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
B8YB55	n/a	2waq	ZN	B	1500	e2waqB2	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
B8YB55	n/a	2waq	ZN	B	1500	e2waqB3	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
B8YB55	n/a	2waq	ZN	B	1500	e2waqB5	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	RNA_pol_Rpb2_6
B8YB55	n/a	2wb1	ZN	B	2123	e2wb1B1	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
B8YB55	n/a	2wb1	ZN	R	2123	e2wb1R1	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
B8YB55	n/a	2y0s	ZN	B	2125	e2y0sB6	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
B8YB55	n/a	2y0s	ZN	R	2125	e2y0sR2	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
B8YB55	n/a	2y0s	ZN	R	2125	e2y0sR6	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
B8YB55	n/a	4ayb	ZN	B	2128	e4aybB2	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
B8YB55	n/a	4ayb	ZN	B	2128	e4aybB3	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
B8YB55	n/a	4ayb	ZN	B	2128	e4aybB4	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	RNA_pol_Rpb2_6
B8YB55	n/a	4ayb	ZN	B	2128	e4aybB5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
B8YB55	n/a	4v8s	ZN	AR	1300	e4v8sAR6	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_7
B8YB55	n/a	4v8s	ZN	BB	1300	e4v8sBB1	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	C-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_7