DrugDomain logoDrugDomain

Attributes

UniProt ID
Protein Name
RNA polymerase sigma factor RpoD
Ligand Name
Benzoxazinorifamycin-2b
DrugBank ID
None
PDB Ligand Accession
ChEMBL ID
n/a
PubChem ID
n/a
InChIKey
NCYSEZCFZIFVEB-WLRQHHRRSA-N
SMILES
CCN(CC)CCOc1cccc2c1N=C3c4c5c(c(c6c4C(=O)C(O6)(OC=CC(C(C(C(C(C(C(C(C=CC=C(C(=O)NC(=C3O2)C5=O)C)C)O)C)O)C)OC(=O)C)C)OC)C)C)O
Drug Action
No data available
Affinity Metrics
No affinity data available

3D Structure

Interactive Mol* view for the current protein-molecule pair.

Structure: 4KN4
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Color Legend
Unassigned regionsLigand / hetero atomse4kn4A7e4kn4A8e4kn4A9e4kn4B3e4kn4B4e4kn4C1e4kn4C10e4kn4C12e4kn4C13e4kn4C16e4kn4C17e4kn4C18e4kn4C4e4kn4C8e4kn4C9e4kn4D1e4kn4D2e4kn4D3e4kn4D4e4kn4D5e4kn4D6e4kn4D7e4kn4D8e4kn4E2e4kn4F3e4kn4F4e4kn4G3e4kn4G4e4kn4H1e4kn4H10e4kn4H12e4kn4H13e4kn4H16e4kn4H17e4kn4H18e4kn4H4e4kn4H8e4kn4H9e4kn4I1e4kn4I2e4kn4I3e4kn4I4e4kn4I5e4kn4I6e4kn4I7e4kn4I8e4kn4J1e4kn4X1e4kn4X2e4kn4X3e4kn4X4e4kn4Y1e4kn4Y2e4kn4Y3
ECOD domains from experimental PDB structures interacting with ligand 1RL
UniProtDrugBankPDB LigandPDB IDECOD DomainRange Definition
P00579n/a1RL4kn4e4kn4X3X:508-609
P00579n/a1RL4kn4e4kn4Y2Y:508-609