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DIMETHYL SULFOXIDE

P03366 Gag-Pol polyprotein

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ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB01093

UniProtDrugBankPDB LigandDomain LabelECOD IDX GroupH GroupT GroupF Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB01093

UniProtDrugBankPDB IDLigand Acc.ChainRes No.Exp. DomainX GroupH GroupT GroupF Group
P03366DB010933k4vDMSA902e3k4vA1cradle loop barrelRIFT-relatedacid proteaseRVP
P03366DB010933k4vDMSC901e3k4vC1cradle loop barrelRIFT-relatedacid proteaseRVP
P03366DB010933k4vDMSD202e3k4vD1cradle loop barrelRIFT-relatedacid proteaseRVP
P03366DB010933ndtDMSA104e3ndtA1cradle loop barrelRIFT-relatedacid proteaseRVP
P03366DB010933ndtDMSC103e3ndtC1cradle loop barrelRIFT-relatedacid proteaseRVP
P03366DB010933qlhDMSB1001e3qlhB5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934iclDMSA606e4iclA6Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010934iclDMSB507e4iclB1helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934iclDMSB507e4iclB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934id5DMSA608e4id5A5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934id5DMSB510e4id5A8Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010934id5DMSB510e4id5B5Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010934idkDMSA612e4idkA5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934idkDMSA612e4idkA7helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934idkDMSB507e4idkB1helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934idkDMSB507e4idkB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ifvDMSA606e4ifvA6Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010934ifvDMSB508e4ifvB1helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934ifvDMSB508e4ifvB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ifyDMSA610e4ifyA5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ifyDMSA610e4ifyA7helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934ifyDMSB508e4ifyB1helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934ifyDMSB508e4ifyB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ig0DMSA604e4ig0A5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ig0DMSB502e4ig0A6Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010934ig0DMSB502e4ig0B2helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934ig0DMSB502e4ig0B5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ig3DMSA608e4ig3A5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ig3DMSA608e4ig3A7helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010934ig3DMSB508e4ig3A5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934ig3DMSB508e4ig3B5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934kfbDMSA606e4kfbA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010934kfbDMSA606e4kfbA5Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934kfbDMSB505e4kfbB8Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010934kfbDMSB505e4kfbB9Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010935cymDMSA619e5cymA2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010935cymDMSA619e5cymA3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010935cymDMSB515e5cymA3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010935cymDMSB515e5cymB2Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010935cyqDMSA613e5cyqA2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010935cyqDMSA613e5cyqA3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010935cyqDMSB513e5cyqB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0kDMSA603e6c0kA2helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010936c0kDMSB501e6c0kA3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0kDMSB501e6c0kB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0kDMSB501e6c0kB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936c0nDMSB501e6c0nA2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0nDMSB501e6c0nB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0nDMSB501e6c0nB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936c0oDMSB501e6c0oA2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0oDMSB501e6c0oB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0oDMSB501e6c0oB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936c0pDMSB501e6c0pA1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0pDMSB501e6c0pB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0pDMSB501e6c0pB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936c0rDMSB501e6c0rA4Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0rDMSB501e6c0rB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936c0rDMSB501e6c0rB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936dufDMSB501e6dufA1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936dufDMSB501e6dufB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936dufDMSB501e6dufB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936dugDMSB501e6dugA1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936dugDMSB501e6dugB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936dugDMSB501e6dugB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936duhDMSB501e6duhA4Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010936duhDMSB501e6duhB2Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010936duhDMSB501e6duhB3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010937lpwDMSA604e7lpwA2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010937lpwDMSA604e7lpwA4Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010937lpwDMSB503e7lpwA2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010937lpwDMSB503e7lpwB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010937lpwDMSB503e7lpwB3helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dx2DMSA604e8dx2A3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dx2DMSB502e8dx2A4Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dx2DMSB502e8dx2B2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dx2DMSB502e8dx2B3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010938dx3DMSA707e8dx3A4Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dx3DMSB504e8dx3B2helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dx3DMSB504e8dx3B3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dx8DMSA605e8dx8A2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dx8DMSB504e8dx8A2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dx8DMSB504e8dx8B2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dx8DMSB504e8dx8B3helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxbDMSA907e8dxbA1Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxbDMSB505e8dxbB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxbDMSB505e8dxbB3helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxeDMSA605e8dxeA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxeDMSB504e8dxeA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxeDMSB504e8dxeB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxeDMSB504e8dxeB3helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxgDMSA605e8dxgA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxgDMSB506e8dxgA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxgDMSB506e8dxgB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxgDMSB506e8dxgB2helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxhDMSA607e8dxhA2Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxhDMSB507e8dxhB2helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxhDMSB507e8dxhB3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxiDMSA605e8dxiA4Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxiDMSB503e8dxiB3helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxjDMSA604e8dxjA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxjDMSB503e8dxjA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxjDMSB503e8dxjB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxjDMSB503e8dxjB3helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxkDMSA602e8dxkA2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxkDMSA602e8dxkA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxkDMSB505e8dxkB1Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxkDMSB505e8dxkB2helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxlDMSA603e8dxlA2Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010938dxlDMSA603e8dxlB3Alpha-beta plaitsAdenylyl and guanylyl cyclase catalytic domain-likeAdenylyl and guanylyl cyclase catalytic domain-likeRVT_1
P03366DB010938dxlDMSB503e8dxlA3Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxlDMSB503e8dxlB1helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxlDMSB503e8dxlB2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938dxmDMSA606e8dxmA4Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxmDMSB505e8dxmA4Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H
P03366DB010938dxmDMSB505e8dxmB1helical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymeraseshelical bundle domain in reverse transcriptase-like polymerasesRVT_thumb
P03366DB010938dxmDMSB505e8dxmB3Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938ffxDMSA601e8ffxA2Ribonuclease H-likeRNaseH-like domain in reverse transcriptaseRNaseH-like domain in reverse transcriptaseRVT_connect
P03366DB010938ffxDMSA601e8ffxA4Ribonuclease H-likeRibonuclease H-likeRibonuclease H-likeRNase_H