SODIUM ION

P03366 — Gag-Pol polyprotein

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand NA

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand NA

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P03366	n/a	2hb3	NA	A	904	e2hb3A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	2hb3	NA	B	905	e2hb3B1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	2iaj	NA	A	564	e2iajA5	Ribonuclease H-like	RNaseH-like domain in reverse transcriptase	RNaseH-like domain in reverse transcriptase	RVT_connect
P03366	n/a	2iaj	NA	A	564	e2iajA8	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	RVT_1
P03366	n/a	3ndt	NA	B	101	e3ndtB1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3ndt	NA	C	100	e3ndtC1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3nu3	NA	A	501	e3nu3A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3nu4	NA	A	500	e3nu4A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3nu5	NA	A	501	e3nu5A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3nu5	NA	B	503	e3nu5B1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3nu6	NA	A	503	e3nu6A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3ok9	NA	A	502	e3ok9A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3ok9	NA	B	501	e3ok9B1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	3qaa	NA	A	501	e3qaaA1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	4u8w	NA	A	202	e4u8wA1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	4yhq	NA	A	207	e4yhqA1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	4zip	NA	A	501	e4zipA1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	4zip	NA	B	203	e4zipB1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	4zls	NA	A	501	e4zlsA1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	5bry	NA	A	501	e5bryA1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	5bry	NA	B	202	e5bryB1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	5bs4	NA	A	202	e5bs4A1	cradle loop barrel	RIFT-related	acid protease	RVP
P03366	n/a	6c0l	NA	A	603	e6c0lA1	Ribonuclease H-like	RNaseH-like domain in reverse transcriptase	RNaseH-like domain in reverse transcriptase	RVT_connect
P03366	n/a	6c0l	NA	A	603	e6c0lA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	RNase_H
P03366	n/a	6cgf	NA	A	603	e6cgfA1	Ribonuclease H-like	RNaseH-like domain in reverse transcriptase	RNaseH-like domain in reverse transcriptase	RVT_connect
P03366	n/a	6cgf	NA	A	603	e6cgfA2	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	RNase_H