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3-({3-[(3-{[4-({4-[(4-{[4-({(2R)-2-amino-4-[(1-methyl-4-{[1-methyl-4-({1-methyl-4-[(1-methyl-1H-imidazole-2-carbonyl)amino]-1H-imidazole-2-carbonyl}amino)-1H-pyrrole-2-carbonyl]amino}-1H-pyrrole-2-carbonyl)amino]butanoyl}amino)-1-methyl-1H-imidazole-2-carbonyl]amino}-1-methyl-1H-pyrrole-2-carbonyl)amino]-1-methyl-1H-pyrrole-2-carbonyl}amino)-1-methyl-1H-pyrrole-2-carbonyl]amino}propyl)(methyl)amino]propyl}carbamoyl)benzoic acid

P04050 — DNA-directed RNA polymerase II subunit RPB1

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ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand 5N0

UniProtDrugBankPDB LigandDomain LabelECOD IDX GroupH GroupT GroupF Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand 5N0

UniProtDrugBankPDB IDLigand Acc.ChainRes No.Exp. DomainX GroupH GroupT GroupF Group
P04050n/a7rim5N0T101e7rimA4N-terminal domain in RNA-polymerase beta-prime subunitN-terminal domain in RNA-polymerase beta-prime subunitN-terminal domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_1
P04050n/a7rim5N0T101e7rimA8central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5
P04050n/a7rip5N0T101e7ripA7central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5
P04050n/a7rix5N0T101e7rixA5central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5
P04050n/a7riy5N0T101e7riyA5central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5