ADENOSINE-5'-TRIPHOSPHATE

P04050 — DNA-directed RNA polymerase II subunit RPB1

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB00171

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB00171

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P04050	DB00171	1r9t	ATP	B	1308	e1r9tA2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB00171	1r9t	ATP	B	1308	e1r9tA6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB00171	1twa	ATP	A	3011	e1twaA4	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB00171	1twa	ATP	A	3011	e1twaA5	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P04050	DB00171	1twa	ATP	A	3011	e1twaA8	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB00171	1twh	ATP	A	3011	e1twhA4	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB00171	1twh	ATP	A	3011	e1twhA5	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P04050	DB00171	1twh	ATP	A	3011	e1twhA8	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB00171	3s1q	ATP	A	1736	e3s1qA2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB00171	3s1q	ATP	A	1736	e3s1qA4	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P04050	DB00171	3s1q	ATP	A	1736	e3s1qA6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2