DEOXYURIDINE-5'-TRIPHOSPHATE
P04050 — DNA-directed RNA polymerase II subunit RPB1
ECOD Domain Annotations
ECOD domains from AlphaFold model interacting with ligand DB02333
| UniProt | DrugBank | PDB Ligand | Domain Label | ECOD ID | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|
| No predicted ECOD data found | ||||||||
ECOD domains from experimental PDB structures interacting with ligand DB02333
| UniProt | DrugBank | PDB ID | Ligand Acc. | Chain | Res No. | Exp. Domain | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|---|---|
| P04050 | DB02333 | 2nvq | DUT | T | 29 | e2nvqA2 | second helical domain in RNA-polymerase beta-prime subunit | second helical domain in RNA-polymerase beta-prime subunit | second helical domain in RNA-polymerase beta-prime subunit | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 |
| P04050 | DB02333 | 2nvq | DUT | T | 29 | e2nvqA6 | cradle loop barrel | RIFT-related | double psi | RNA_pol_Rpb1_2 |
| P04050 | DB02333 | 2nvx | DUT | B | 1308 | e2nvxA2 | second helical domain in RNA-polymerase beta-prime subunit | second helical domain in RNA-polymerase beta-prime subunit | second helical domain in RNA-polymerase beta-prime subunit | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 |
| P04050 | DB02333 | 2nvx | DUT | B | 1308 | e2nvxA6 | cradle loop barrel | RIFT-related | double psi | RNA_pol_Rpb1_2 |