PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER

P04050 — DNA-directed RNA polymerase II subunit RPB1

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB03532

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB03532

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P04050	DB03532	1y77	G2P	B	1308	e1y77A1	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P04050	DB03532	1y77	G2P	B	1308	e1y77A3	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB03532	1y77	G2P	B	1308	e1y77A5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB03532	2e2j	G2P	T	3000	e2e2jA2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB03532	2e2j	G2P	T	3000	e2e2jA6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB03532	2nvt	G2P	T	3000	e2nvtA5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB03532	2nvt	G2P	T	3000	e2nvtA7	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB03532	4a3j	G2P	T	1024	e4a3jA2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB03532	4a3j	G2P	T	1024	e4a3jA4	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P04050	DB03532	4a3j	G2P	T	1024	e4a3jA6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P04050	DB03532	4y7n	G2P	T	101	e4y7nA2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050	DB03532	4y7n	G2P	T	101	e4y7nA4	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2