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GUANOSINE-5'-TRIPHOSPHATE

P04050 — DNA-directed RNA polymerase II subunit RPB1

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ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB04137

UniProtDrugBankPDB LigandDomain LabelECOD IDX GroupH GroupT GroupF Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB04137

UniProtDrugBankPDB IDLigand Acc.ChainRes No.Exp. DomainX GroupH GroupT GroupF Group
P04050DB041371twcGTPB3008e1twcA4cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
P04050DB041371twcGTPB3008e1twcA8second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050DB041372e2hGTPT3000e2e2hA1central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5
P04050DB041372e2hGTPT3000e2e2hA3second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050DB041372e2hGTPT3000e2e2hA5cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
P04050DB041373s1rGTPR100e3s1rA2second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050DB041373s1rGTPR100e3s1rA6cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2