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PYROPHOSPHATE

P04050 — DNA-directed RNA polymerase II subunit RPB1

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ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB04160

UniProtDrugBankPDB LigandDomain LabelECOD IDX GroupH GroupT GroupF Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB04160

UniProtDrugBankPDB IDLigand Acc.ChainRes No.Exp. DomainX GroupH GroupT GroupF Group
P04050DB041606upzPPVB1301e6upzA1second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050DB041606upzPPVB1301e6upzA6cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
P04050DB041606uq3PPVB1401e6uq3A3second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050DB041606uq3PPVB1401e6uq3A5cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
P04050DB041607ripPPVB1301e7ripA1second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P04050DB041607ripPPVB1301e7ripA6cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2