Attributes
UniProt ID
Protein Name
DNA-directed RNA polymerase II subunit RPB1
Ligand Name
URIDINE 5'-TRIPHOSPHATE
DrugBank ID
PDB Ligand Accession
ChEMBL ID
n/a
PubChem ID
n/a
InChIKey
PGAVKCOVUIYSFO-XVFCMESISA-N
SMILES
C1=CN(C(=O)NC1=O)C2C(C(C(O2)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
Drug Action
No data available
Affinity Metrics
No affinity data available
3D Structure
Interactive Mol* view for the current protein-molecule pair.
Structure: 1R9S
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Color Legend
Unassigned regionsLigand / hetero atomse1r9sA10e1r9sA11e1r9sA12e1r9sA13e1r9sA14e1r9sA3e1r9sA7e1r9sA8e1r9sA9e1r9sB1e1r9sB2e1r9sB3e1r9sB4e1r9sB5e1r9sB6e1r9sB7e1r9sC2e1r9sC3e1r9sE1e1r9sE2e1r9sF1e1r9sH1e1r9sI3e1r9sI4e1r9sJ1e1r9sK1e1r9sL1
ECOD domains from experimental PDB structures interacting with ligand DB04005
| UniProt | DrugBank | PDB Ligand | PDB ID | ECOD Domain | Range Definition |
|---|---|---|---|---|---|
| P04050 | DB04005 | UTP | 1r9s | e1r9sA10 | A:337-374,A:436-519 |
| P04050 | DB04005 | UTP | 1r9s | e1r9sA12 | A:663-871 |
| P04050 | DB04005 | UTP | 1twf | e1twfA1 | A:337-374,A:436-519 |
| P04050 | DB04005 | UTP | 1twf | e1twfA10 | A:663-871 |
| P04050 | DB04005 | UTP | 2nvz | e2nvzA11 | A:1060-1102,A:1301-1445 |
| P04050 | DB04005 | UTP | 2nvz | e2nvzA13 | A:337-374,A:436-519 |
| P04050 | DB04005 | UTP | 2nvz | e2nvzA15 | A:663-871 |
| P04050 | DB04005 | UTP | 2yu9 | e2yu9A5 | A:337-374,A:436-519 |
| P04050 | DB04005 | UTP | 2yu9 | e2yu9A7 | A:663-871 |