(1S)-1,4-anhydro-5-O-[(R)-hydroxy{[(S)-hydroxy(phosphonooxy)phosphoryl]oxy}phosphoryl]-1-(3-methoxynaphthalen-2-yl)-D-ribitol
P04050 — DNA-directed RNA polymerase II subunit RPB1
ECOD Domain Annotations
ECOD domains from AlphaFold model interacting with ligand WCG
| UniProt | DrugBank | PDB Ligand | Domain Label | ECOD ID | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|
| No predicted ECOD data found | ||||||||
ECOD domains from experimental PDB structures interacting with ligand WCG
| UniProt | DrugBank | PDB ID | Ligand Acc. | Chain | Res No. | Exp. Domain | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|---|---|
| P04050 | n/a | 7kee | WCG | B | 2101 | e7keeA8 | second helical domain in RNA-polymerase beta-prime subunit | second helical domain in RNA-polymerase beta-prime subunit | second helical domain in RNA-polymerase beta-prime subunit | RNA_pol_Rpb1_5,RNA_pol_Rpb1_4 |
| P04050 | n/a | 7kee | WCG | B | 2101 | e7keeA9 | cradle loop barrel | RIFT-related | double psi | RNA_pol_Rpb1_2 |