MANGANESE (II) ION

P06746 — DNA polymerase beta

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand MN

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand MN

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P06746	n/a	1zql	MN	A	342	e1zqlA2	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	1zqm	MN	A	342	e1zqmA2	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	1zqq	MN	A	343	e1zqqA1	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	3c2k	MN	A	344	e3c2kA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	3c2l	MN	A	344	e3c2lA2	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	3c2m	MN	A	345	e3c2mA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	3isd	MN	A	411	e3isdA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	3rh4	MN	A	346	e3rh4A3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	3rh4	MN	P	345	e3rh4A2	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	3rh5	MN	A	345	e3rh5A3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	3rh6	MN	A	342	e3rh6A3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4f5q	MN	A	402	e4f5qA8	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4f5r	MN	B	402	e4f5rB8	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4gxj	MN	A	405	e4gxjA8	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4gxk	MN	A	403	e4gxkA9	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	4klh	MN	A	402	e4klhA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4klq	MN	A	405	e4klqA2	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	4kls	MN	A	406	e4klsA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4klt	MN	A	405	e4kltA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4lvs	MN	A	404	e4lvsA6	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	4nxz	MN	A	401	e4nxzA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4ny8	MN	A	402	e4ny8A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4p2h	MN	A	401	e4p2hA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4pgx	MN	A	401	e4pgxA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4phd	MN	A	402	e4phdA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4php	MN	A	402	e4phpA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4r66	MN	A	403	e4r66A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4rq2	MN	A	406	e4rq2A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4rq8	MN	A	406	e4rq8A1	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	4rq8	MN	A	406	e4rq8A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4tus	MN	A	402	e4tusA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4ub5	MN	A	402	e4ub5A1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4ymo	MN	A	402	e4ymoA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4yn4	MN	A	401	e4yn4A3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4z6e	MN	A	401	e4z6eA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4z6e	MN	P	401	e4z6eA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	4z6f	MN	A	401	e4z6fA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	5bpc	MN	A	404	e5bpcA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	5tb8	MN	A	407	e5tb8A1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	5tb9	MN	A	407	e5tb9A1	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	HHH_8
P06746	n/a	5tb9	MN	A	407	e5tb9A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	5tbb	MN	A	401	e5tbbA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	5u9h	MN	A	404	e5u9hA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	5u9h	MN	A	404	e5u9hA3	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	5u9h	MN	T	101	e5u9hA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6cu9	MN	A	402	e6cu9A3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6cua	MN	A	402	e6cuaA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6cub	MN	A	403	e6cubA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6u6b	MN	A	402	e6u6bA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6uok	MN	A	404	e6uokA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6uok	MN	F	408	e6uokF3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6uol	MN	A	411	e6uolA2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	6uom	MN	A	404	e6uomA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	7k97	MN	A	405	e7k97A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	7k97	MN	P	102	e7k97A2	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	7rbm	MN	A	411	e7rbmA1	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	7s9p	MN	A	404	e7s9pA1	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	7s9p	MN	A	404	e7s9pA3	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	7s9q	MN	A	407	e7s9qA2	HhH/H2TH	SAM/DNA-glycosylase	SAM domain-like	DNA_pol_lambd_f
P06746	n/a	8ick	MN	A	340	e8ickA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icn	MN	A	339	e8icnA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8ico	MN	A	340	e8icoA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icp	MN	A	339	e8icpA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icr	MN	A	340	e8icrA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8ics	MN	A	340	e8icsA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8ict	MN	A	340	e8ictA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icu	MN	A	340	e8icuA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icv	MN	A	339	e8icvA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icw	MN	A	339	e8icwA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icx	MN	A	340	e8icxA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	8icy	MN	A	339	e8icyA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9ica	MN	A	340	e9icaA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9icl	MN	A	340	e9iclA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9icq	MN	A	340	e9icqA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9icr	MN	A	340	e9icrA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9ics	MN	A	340	e9icsA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9ict	MN	A	340	e9ictA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm
P06746	n/a	9icu	MN	A	339	e9icuA3	Nucleotidyltransferase-like	Nucleotidyltransferase	Nucleotidyltransferase	DNA_pol_B_thumb,DNA_pol_B_palm