DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER

P08518 — DNA-directed RNA polymerase II subunit RPB2

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB02596

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB02596

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P08518	DB02596	4a3e	APC	P	1011	e4a3eB1	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
P08518	DB02596	4a3e	APC	P	1011	e4a3eB2	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	4a3e	APC	P	1011	e4a3eB5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
P08518	DB02596	4a3f	APC	A	2455	e4a3fB1	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
P08518	DB02596	4a3f	APC	A	2455	e4a3fB3	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	4a3f	APC	A	2455	e4a3fB4	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
P08518	DB02596	4a3l	APC	P	1011	e4a3lB3	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	N-terminal domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_1,RNA_pol_Rpb2_3
P08518	DB02596	4a3l	APC	P	1011	e4a3lB6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
P08518	DB02596	4a3l	APC	P	1011	e4a3lB7	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	4a3m	APC	A	2455	e4a3mB5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
P08518	DB02596	4a3m	APC	A	2455	e4a3mB7	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	4by1	APC	P	12	e4by1B3	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
P08518	DB02596	4by1	APC	P	12	e4by1B6	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	6blp	APC	A	1805	e6blpB1	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6
P08518	DB02596	6blp	APC	A	1805	e6blpB5	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	6upy	APC	B	1301	e6upyB1	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	barrel domain in beta subunit of DNA dependent RNA-polymerase	RNA_pol_Rpb2_6,RNA_pol_Rpb2_5
P08518	DB02596	6upy	APC	B	1301	e6upyB7	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb2_6