CYTIDINE-5'-TRIPHOSPHATE

P0A8T7 — DNA-directed RNA polymerase subunit beta'

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB02431

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB02431

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P0A8T7	DB02431	6rh3	CTP	D	1503	e6rh3D1	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	DB02431	6rh3	CTP	D	1503	e6rh3D2	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P0A8T7	DB02431	6rh3	CTP	D	1503	e6rh3D4	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	DB02431	6rh3	CTP	D	1503	e6rh3D9	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	DB02431	6uty	CTP	DDD	1505	e6utyDDD1	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	DB02431	6uty	CTP	DDD	1505	e6utyDDD2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	DB02431	6uty	CTP	DDD	1505	e6utyDDD3	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	DB02431	6uu1	CTP	333	201	e6uu1DDD2	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	DB02431	6uu1	CTP	333	201	e6uu1DDD5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	DB02431	6uu1	CTP	333	201	e6uu1DDD7	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	DB02431	6uu1	CTP	333	201	e6uu1DDD8	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P0A8T7	DB02431	6uu3	CTP	DDD	1505	e6uu3DDD1	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	DB02431	6uu3	CTP	DDD	1505	e6uu3DDD3	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P0A8T7	DB02431	6uu3	CTP	DDD	1505	e6uu3DDD6	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	DB02431	6uu3	CTP	DDD	1505	e6uu3DDD8	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	DB02431	6uua	CTP	DDD	1505	e6uuaDDD1	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
P0A8T7	DB02431	6uua	CTP	DDD	1505	e6uuaDDD2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	DB02431	6uua	CTP	DDD	1505	e6uuaDDD4	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	DB02431	6uua	CTP	DDD	1505	e6uuaDDD7	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2