DIPHOSPHATE

P0A8T7 — DNA-directed RNA polymerase subunit beta'

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DPO

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DPO

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
P0A8T7	n/a	5ipl	DPO	C	1401	e5iplD6	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	n/a	5ipl	DPO	C	1401	e5iplD8	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6utv	DPO	DDD	1504	e6utvDDD6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6utv	DPO	DDD	1504	e6utvDDD8	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	n/a	6utv	DPO	DDD	1504	e6utvDDD9	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	n/a	6utw	DPO	DDD	1504	e6utwDDD2	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6utw	DPO	DDD	1504	e6utwDDD7	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	n/a	6utw	DPO	DDD	1504	e6utwDDD9	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	n/a	6utz	DPO	CCC	1402	e6utzDDD3	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	n/a	6utz	DPO	CCC	1402	e6utzDDD6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6utz	DPO	CCC	1402	e6utzDDD8	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	n/a	6uu5	DPO	DDD	1504	e6uu5DDD1	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	n/a	6uu5	DPO	DDD	1504	e6uu5DDD2	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6uu5	DPO	DDD	1504	e6uu5DDD9	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	n/a	6uu8	DPO	DDD	1504	e6uu8DDD4	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	n/a	6uu8	DPO	DDD	1504	e6uu8DDD7	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6uu8	DPO	DDD	1504	e6uu8DDD9	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
P0A8T7	n/a	6uu9	DPO	DDD	1506	e6uu9DDD2	alpha/beta-Hammerhead/Barrel-sandwich hybrid	alpha/beta-Hammerhead/Barrel-sandwich hybrid	Single hybrid motif	n/a
P0A8T7	n/a	6uu9	DPO	DDD	1506	e6uu9DDD8	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
P0A8T7	n/a	6uu9	DPO	DDD	1506	e6uu9DDD9	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4