(2S,7R,7aR,13aP,16Z,18E,20S,21S,22R,23R,24R,25S,26R,27S,28E)-5,21,23-trihydroxy-27-methoxy-2,4,16,20,22,24,26-heptamethyl-10-[4-(2-methylpropyl)piperazin-1-yl]-12-({4-[(morpholin-4-yl)methyl]phenyl}methoxy)-1,6,15-trioxo-1,2,7,7a-tetrahydro-6H-2,7-(epoxypentadeca[1,11,13]trienoimino)[1]benzofuro[4,5-a]phenoxazin-25-yl acetate
P0A8V2 — DNA-directed RNA polymerase subunit beta
ECOD Domain Annotations
ECOD domains from AlphaFold model interacting with ligand D9X
| UniProt | DrugBank | PDB Ligand | Domain Label | ECOD ID | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|
| No predicted ECOD data found | ||||||||
ECOD domains from experimental PDB structures interacting with ligand D9X
| UniProt | DrugBank | PDB ID | Ligand Acc. | Chain | Res No. | Exp. Domain | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|---|---|
| P0A8V2 | n/a | 7szk | D9X | C | 3001 | e7szkC1 | cradle loop barrel | RIFT-related | double psi | RNA_pol_Rpb2_6 |
| P0A8V2 | n/a | 7szk | D9X | C | 3001 | e7szkC10 | barrel domain in beta subunit of DNA dependent RNA-polymerase | barrel domain in beta subunit of DNA dependent RNA-polymerase | barrel domain in beta subunit of DNA dependent RNA-polymerase | RNA_pol_Rpb2_45 |
| P0A8V2 | n/a | 7szk | D9X | C | 3001 | e7szkC2 | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 |
| P0A8V2 | n/a | 7szk | D9X | C | 3001 | e7szkC6 | alpha/beta-Hammerhead/Barrel-sandwich hybrid | alpha/beta-Hammerhead/Barrel-sandwich hybrid | Single hybrid motif | RNA_pol_Rpb2_6 |