| 3EPZ | e3epzA2 | 101.33.1 | HTH | Replication foci-targeting sequence C-terminal domain | Replication foci-targeting sequence C-terminal domain | DNMT1-RFD |
| e3epzB2 | 101.33.1 | HTH | Replication foci-targeting sequence C-terminal domain | Replication foci-targeting sequence C-terminal domain | DNMT1-RFD |
| e3epzA1 | 3497.1.1 | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | DNMT1-RFD |
| e3epzB1 | 3497.1.1 | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | DNMT1-RFD |
| 3PTA | e3ptaA1 | 2003.1.5 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases | DNA_methylase |
| e3ptaA4 | 3109.1.1 | CXXC domain-like | CXXC domain | CXXC domain | zf-CXXC |
| e3ptaA5 | 3109.2.1 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | n/a |
| e3ptaA2 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| e3ptaA3 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| 3SWR | e3swrA1 | 2003.1.5 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases | DNA_methylase |
| e3swrA4 | 3109.1.1 | CXXC domain-like | CXXC domain | CXXC domain | zf-CXXC |
| e3swrA5 | 3109.2.1 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | n/a |
| e3swrA2 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| e3swrA3 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| 4WXX | e4wxxA2 | 101.33.1 | HTH | Replication foci-targeting sequence C-terminal domain | Replication foci-targeting sequence C-terminal domain | DNMT1-RFD |
| e4wxxB3 | 101.33.1 | HTH | Replication foci-targeting sequence C-terminal domain | Replication foci-targeting sequence C-terminal domain | DNMT1-RFD |
| e4wxxA4 | 2003.1.5 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases | DNA_methylase |
| e4wxxB4 | 2003.1.5 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases | DNA_methylase |
| e4wxxA5 | 3109.1.1 | CXXC domain-like | CXXC domain | CXXC domain | zf-CXXC |
| e4wxxB6 | 3109.1.1 | CXXC domain-like | CXXC domain | CXXC domain | zf-CXXC |
| e4wxxA7 | 3109.2.1 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | n/a |
| e4wxxB5 | 3109.2.1 | CXXC domain-like | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | C-terminal Zn-binding domain in DNA (cytosine-5)-methyltransferase 1 | n/a |
| e4wxxA6 | 3497.1.1 | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | DNMT1-RFD |
| e4wxxB2 | 3497.1.1 | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | DNMT1-RFD |
| e4wxxA1 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| e4wxxA3 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| e4wxxB1 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| e4wxxB7 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| 4YOC | e4yocA1 | 2003.1.5 | Rossmann-like | Rossmann-related | S-adenosyl-L-methionine-dependent methyltransferases | DNA_methylase |
| e4yocA2 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| e4yocA3 | 4.1.1 | SH3 | SH3 | SH3 | SH3_1 |
| 5WVO | e5wvoC1 | 101.33.1 | HTH | Replication foci-targeting sequence C-terminal domain | Replication foci-targeting sequence C-terminal domain | DNMT1-RFD |
| e5wvoC2 | 3497.1.1 | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | DNMT1-RFD |
| 5YDR | e5ydrB2 | 101.33.1 | HTH | Replication foci-targeting sequence C-terminal domain | Replication foci-targeting sequence C-terminal domain | DNMT1-RFD |
| e5ydrB1 | 3497.1.1 | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | Replication foci-targeting sequence N-terminal domain | DNMT1-RFD |