Attributes
UniProt ID
Protein Name
DNA gyrase subunit B
Ligand Name
GLYCEROL
DrugBank ID
PDB Ligand Accession
ChEMBL ID
n/a
PubChem ID
n/a
InChIKey
PEDCQBHIVMGVHV-UHFFFAOYSA-N
SMILES
C(C(CO)O)O
Drug Action
No data available
Affinity Metrics
No affinity data available
3D Structure
Interactive Mol* view for the current protein-molecule pair.
Structure: 5CDM
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Color Legend
Unassigned regionsLigand / hetero atomse5cdmA1e5cdmA2e5cdmA3e5cdmB1e5cdmC1e5cdmC2e5cdmC3e5cdmD1
ECOD domains from experimental PDB structures interacting with ligand DB09462
| UniProt | DrugBank | PDB Ligand | PDB ID | ECOD Domain | Range Definition |
|---|---|---|---|---|---|
| P66937 | DB09462 | GOL | 5cdm | e5cdmB1 | B:417-639 |
| P66937 | DB09462 | GOL | 5cdo | e5cdoD1 | D:417-638 |
| P66937 | DB09462 | GOL | 5cdo | e5cdoU1 | U:417-637 |
| P66937 | DB09462 | GOL | 5npk | e5npkB1 | B:1144-1327 |
| P66937 | DB09462 | GOL | 5npk | e5npkB3 | B:638-1143 |
| P66937 | DB09462 | GOL | 5npk | e5npkD2 | D:1144-1327 |
| P66937 | DB09462 | GOL | 5npk | e5npkD4 | D:638-1143 |
| P66937 | DB09462 | GOL | 5npk | e5npkb2 | b:417-637 |
| P66937 | DB09462 | GOL | 5npk | e5npkb5 | b:638-1143 |
| P66937 | DB09462 | GOL | 5npk | e5npkd1 | d:638-1143 |
| P66937 | DB09462 | GOL | 5npk | e5npkd2 | d:417-637 |
| P66937 | DB09462 | GOL | 5npk | e5npkd4 | d:1144-1327 |
| P66937 | DB09462 | GOL | 5npp | e5nppB1 | B:1328-1491 |
| P66937 | DB09462 | GOL | 5npp | e5nppB4 | B:1144-1327 |
| P66937 | DB09462 | GOL | 5npp | e5nppB5 | B:1009-1143 |
| P66937 | DB09462 | GOL | 5npp | e5nppD4 | D:1328-1490 |
| P66937 | DB09462 | GOL | 5npp | e5nppD6 | D:1009-1143 |
| P66937 | DB09462 | GOL | 6fqs | e6fqsB1 | B:417-640 |
| P66937 | DB09462 | GOL | 6fqv | e6fqvU1 | U:417-642 |
| P66937 | DB09462 | GOL | 6qtk | e6qtkB1 | B:415-640 |
| P66937 | DB09462 | GOL | 8bp2 | e8bp2BBB1 | BBB:417-639 |