CALCIUM ION

Q38087 — DNA-directed DNA polymerase

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand CA

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand CA

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
Q38087	n/a	1clq	CA	A	1025	e1clqA3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	1clq	CA	D	1009	e1clqA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	1ig9	CA	A	1004	e1ig9A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	1q9x	CA	A	1002	e1q9xA3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	1q9x	CA	B	1004	e1q9xB3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	1q9x	CA	C	1006	e1q9xC3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	1q9x	CA	D	1008	e1q9xD3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	1q9y	CA	A	941	e1q9yA3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3cfp	CA	A	1004	e3cfpA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3cfr	CA	A	914	e3cfrA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3cq8	CA	A	1006	e3cq8A3	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3lzi	CA	A	909	e3lziA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3lzj	CA	A	908	e3lzjA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3nae	CA	A	908	e3naeA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3nci	CA	A	907	e3nciA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3ndk	CA	A	911	e3ndkA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3ne6	CA	A	908	e3ne6A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3ngi	CA	A	912	e3ngiA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3ngi	CA	A	912	e3ngiA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3nhg	CA	A	910	e3nhgA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3qei	CA	A	908	e3qeiA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3qep	CA	A	910	e3qepA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3qer	CA	A	908	e3qerA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3qes	CA	A	909	e3qesA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3qet	CA	A	910	e3qetA5	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3qev	CA	A	909	e3qevA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3qew	CA	A	909	e3qewA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3qex	CA	A	909	e3qexA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3qnn	CA	A	909	e3qnnA7	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3qnn	CA	A	909	e3qnnA8	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3qno	CA	A	906	e3qnoA5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3rwu	CA	A	906	e3rwuA5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3s9h	CA	A	910	e3s9hA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3s9h	CA	A	910	e3s9hA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3scx	CA	A	908	e3scxA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3scx	CA	A	908	e3scxA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	3spz	CA	A	908	e3spzA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3sq1	CA	A	907	e3sq1A6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	3sq2	CA	A	908	e3sq2A5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3sq4	CA	A	908	e3sq4A5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3sun	CA	A	901	e3sunA5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3suo	CA	A	906	e3suoA5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3sup	CA	A	909	e3supA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3suq	CA	A	903	e3suqA5	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	3uiq	CA	A	910	e3uiqA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dtj	CA	A	1006	e4dtjA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dtm	CA	A	1006	e4dtmA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dtn	CA	A	1006	e4dtnA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dto	CA	A	1006	e4dtoA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dtp	CA	A	1006	e4dtpA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dtr	CA	A	1005	e4dtrA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dts	CA	A	1005	e4dtsA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4dtu	CA	A	1006	e4dtuA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4dtu	CA	A	1006	e4dtuA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4dtx	CA	A	1005	e4dtxA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4du1	CA	A	1008	e4du1A7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4du3	CA	A	1008	e4du3A7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4du4	CA	A	1008	e4du4A7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4e3s	CA	A	1006	e4e3sA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fj5	CA	A	1006	e4fj5A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fj7	CA	A	1006	e4fj7A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fj8	CA	A	1006	e4fj8A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fj9	CA	A	1006	e4fj9A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjg	CA	A	1006	e4fjgA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjh	CA	A	1006	e4fjhA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fji	CA	A	1006	e4fjiA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjj	CA	A	1006	e4fjjA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjk	CA	A	1006	e4fjkA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjl	CA	A	1006	e4fjlA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjm	CA	A	1006	e4fjmA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjn	CA	A	1006	e4fjnA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fjx	CA	A	1006	e4fjxA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fk0	CA	A	1006	e4fk0A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fk2	CA	A	1006	e4fk2A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4fk4	CA	A	1006	e4fk4A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4i9q	CA	A	1003	e4i9qA1	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4i9q	CA	B	1003	e4i9qB2	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4j2a	CA	A	1007	e4j2aA8	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4j2b	CA	A	1007	e4j2bA2	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4j2d	CA	A	1010	e4j2dA1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4j2e	CA	A	1006	e4j2eA1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4khn	CA	A	1002	e4khnA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4khn	CA	A	1002	e4khnA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4khn	CA	B	1004	e4khnB2	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4khn	CA	B	1004	e4khnB4	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4khq	CA	A	1004	e4khqA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4khs	CA	A	1007	e4khsA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4khu	CA	A	1004	e4khuA4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4khw	CA	A	1010	e4khwA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4khw	CA	A	1010	e4khwA7	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	4khy	CA	A	1010	e4khyA6	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	fingers domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4ki4	CA	A	1007	e4ki4A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4ki6	CA	A	1007	e4ki6A4	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m3r	CA	A	1008	e4m3rA8	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4m3t	CA	A	1006	e4m3tA1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m3u	CA	A	1007	e4m3uA2	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4m3w	CA	A	1007	e4m3wA2	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a
Q38087	n/a	4m3x	CA	A	1006	e4m3xA1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m3y	CA	A	1006	e4m3yA1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m3z	CA	A	1006	e4m3zA1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m41	CA	A	1006	e4m41A1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m42	CA	A	1006	e4m42A1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	4m45	CA	A	1006	e4m45A1	Ribonuclease H-like	Ribonuclease H-like	Ribonuclease H-like	DNA_pol_B_exo1
Q38087	n/a	7f4y	CA	A	1002	e7f4yA4	Alpha-beta plaits	Adenylyl and guanylyl cyclase catalytic domain-like	Adenylyl and guanylyl cyclase catalytic domain-like	DNA_pol_B
Q38087	n/a	7f4y	CA	B	1001	e7f4yB1	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	thumb domain in bacteriophage RB69-like DNA polymerase I	n/a