MAGNESIUM ION

Q59961 — DNA topoisomerase 4 subunit B

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand MG

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand MG

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
Q59961	n/a	3k9f	MG	C	742	e3k9fC1	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3k9f	MG	C	742	e3k9fC2	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3k9f	MG	D	742	e3k9fD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3k9f	MG	D	742	e3k9fD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3ksa	MG	C	742	e3ksaC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3ksa	MG	C	742	e3ksaC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3ksa	MG	D	742	e3ksaD2	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3ksb	MG	C	742	e3ksbC1	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3ksb	MG	C	742	e3ksbC2	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3ksb	MG	D	742	e3ksbD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3ksb	MG	D	742	e3ksbD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3ltn	MG	C	742	e3ltnC1	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3ltn	MG	C	742	e3ltnC2	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3ltn	MG	D	742	e3ltnD1	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3ltn	MG	D	742	e3ltnD2	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3rad	MG	C	701	e3radC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3rad	MG	C	701	e3radC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3rad	MG	D	701	e3radD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3rad	MG	D	701	e3radD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3rae	MG	C	701	e3raeC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3rae	MG	C	701	e3raeC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3rae	MG	D	701	e3raeD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3rae	MG	D	701	e3raeD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3raf	MG	C	742	e3rafC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3raf	MG	C	742	e3rafC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	3raf	MG	D	742	e3rafD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	3raf	MG	D	742	e3rafD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	4juo	MG	C	701	e4juoC4	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4koe	MG	C	701	e4koeC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4koe	MG	C	701	e4koeC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	4koe	MG	D	701	e4koeD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4koe	MG	D	701	e4koeD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	4kpe	MG	C	701	e4kpeC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4kpe	MG	C	701	e4kpeC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	4kpe	MG	D	701	e4kpeD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4kpf	MG	C	701	e4kpfC1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4kpf	MG	C	701	e4kpfC2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	4kpf	MG	D	701	e4kpfD1	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4kpf	MG	D	701	e4kpfD2	SSHS domain	SSHS domain in type II DNA topoisomerase	SSHS domain in type II DNA topoisomerase	GyrB_hook
Q59961	n/a	4z3o	MG	A	1502	e4z3oA2	HTH	HTH	winged helix domain	DNA_topoisoIV
Q59961	n/a	4z3o	MG	B	1502	e4z3oB3	HTH	HTH	winged helix domain	DNA_topoisoIV
Q59961	n/a	4z4q	MG	A	1502	e4z4qA5	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4z4q	MG	B	1502	e4z4qB4	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4z53	MG	A	1502	e4z53A5	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	4z53	MG	B	1502	e4z53B5	HAD domain-like	HAD domain-related	Toprim domain	DNA_gyraseB_C,Toprim
Q59961	n/a	5j5p	MG	A	504	e5j5pA2	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	DNA_gyraseB
Q59961	n/a	5j5p	MG	B	504	e5j5pB1	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	Ribosomal protein S5 domain 2-like	DNA_gyraseB
Q59961	n/a	5j5p	MG	B	504	e5j5pB2	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HATPase_c
Q59961	n/a	5j5q	MG	A	502	e5j5qA1	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HATPase_c
Q59961	n/a	5j5q	MG	B	502	e5j5qB1	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HATPase_c
Q59961	n/a	5j5q	MG	C	502	e5j5qC2	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HATPase_c
Q59961	n/a	5j5q	MG	D	502	e5j5qD1	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase	HATPase_c