DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER

Q8RQE8 — DNA-directed RNA polymerase subunit beta'

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB02596

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB02596

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
Q8RQE8	DB02596	2o5j	APC	D	3999	e2o5jD2	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	DB02596	2o5j	APC	D	3999	e2o5jD3	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	DB02596	2o5j	APC	D	3999	e2o5jD4	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	DB02596	2o5j	APC	D	3999	e2o5jD5	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
Q8RQE8	DB02596	2o5j	APC	N	4999	e2o5jN17	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
Q8RQE8	DB02596	2o5j	APC	N	4999	e2o5jN18	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	DB02596	2o5j	APC	N	4999	e2o5jN20	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	DB02596	2o5j	APC	N	4999	e2o5jN9	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	DB02596	2ppb	APC	D	5999	e2ppbD5	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	DB02596	2ppb	APC	D	5999	e2ppbD6	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	DB02596	2ppb	APC	D	5999	e2ppbD9	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	DB02596	2ppb	APC	M	6999	e2ppbN2	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	DB02596	2ppb	APC	M	6999	e2ppbN35	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	DB02596	2ppb	APC	M	6999	e2ppbN41	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4