Myxopyronin B

Q8RQE8 — DNA-directed RNA polymerase subunit beta'

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB08226

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB08226

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
Q8RQE8	DB08226	3eql	MXP	D	1527	e3eqlD1	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5
Q8RQE8	DB08226	3eql	MXP	D	1527	e3eqlD2	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	DB08226	3eql	MXP	D	1527	e3eqlD4	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	DB08226	3eql	MXP	D	1527	e3eqlD8	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_1
Q8RQE8	DB08226	3eql	MXP	N	1527	e3eqlN10	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	DB08226	3eql	MXP	N	1527	e3eqlN36	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	N-terminal domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_1
Q8RQE8	DB08226	3eql	MXP	N	1527	e3eqlN40	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	DB08226	3eql	MXP	N	1527	e3eqlN41	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	central helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5