Attributes
UniProt ID
Protein Name
DNA-directed RNA polymerase subunit beta'
Ligand Name
methyl [(1E,5R)-5-{(3S)-3-[(2E,4E)-2,5-dimethylocta-2,4-dienoyl]-2,4-dioxo-3,4-dihydro-2H-pyran-6-yl}hexylidene]carbamate
DrugBank ID
PDB Ligand Accession
ChEMBL ID
n/a
PubChem ID
n/a
InChIKey
LTDLIPXLSBMTFP-FSAISGGASA-N
SMILES
CCCC(=CC=C(C)C(=O)C1C(=O)C=C(OC1=O)C(C)CCCC=NC(=O)OC)C
Drug Action
No data available
Affinity Metrics
No affinity data available
3D Structure
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Structure: 3DXJ
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Color Legend
Unassigned regionsLigand / hetero atomse3dxjA1e3dxjA2e3dxjB1e3dxjB2e3dxjC2e3dxjC4e3dxjC5e3dxjC6e3dxjC7e3dxjC8e3dxjC9e3dxjD1e3dxjD10e3dxjD11e3dxjD12e3dxjD2e3dxjD3e3dxjD4e3dxjD5e3dxjD6e3dxjD7e3dxjD8e3dxjD9e3dxjE1e3dxjF3e3dxjF4e3dxjF5e3dxjK1e3dxjK2e3dxjL2e3dxjL3e3dxjM2e3dxjM4e3dxjM5e3dxjM6e3dxjM7e3dxjM8e3dxjM9e3dxjN1e3dxjN10e3dxjN12e3dxjN13e3dxjN2e3dxjN3e3dxjN4e3dxjN5e3dxjN6e3dxjN7e3dxjN8e3dxjN9e3dxjO1e3dxjP3e3dxjP4e3dxjP5
ECOD domains from experimental PDB structures interacting with ligand DB08266
| UniProt | DrugBank | PDB Ligand | PDB ID | ECOD Domain | Range Definition |
|---|---|---|---|---|---|
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjD11 | D:1201-1269,D:1331-1505 |
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjD2 | D:610-653,D:697-777 |
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjD5 | D:949-1109 |
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjN1 | N:610-653,N:697-777 |
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjN10 | N:2-165,N:449-609 |
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjN4 | N:949-1109 |
| Q8RQE8 | DB08266 | NE6 | 3dxj | e3dxjN9 | N:1201-1269,N:1331-1505 |