PYROPHOSPHATE 2-

Q8RQE8 — DNA-directed RNA polymerase subunit beta'

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand POP

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand POP

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
Q8RQE8	n/a	5vo8	POP	C	1201	e5vo8D12	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	n/a	5vo8	POP	C	1201	e5vo8D6	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	n/a	5vo8	POP	C	1201	e5vo8D9	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	n/a	6ovr	POP	C	1201	e6ovrD3	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	n/a	6ovr	POP	C	1201	e6ovrD4	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	n/a	6ovr	POP	C	1201	e6ovrD7	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	n/a	6ovy	POP	D	1601	e6ovyD11	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	n/a	6ovy	POP	D	1601	e6ovyD3	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	n/a	6ovy	POP	D	1601	e6ovyD6	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	n/a	6ow3	POP	D	1602	e6ow3D10	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	n/a	6ow3	POP	D	1602	e6ow3D2	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8	n/a	6ow3	POP	D	1602	e6ow3D5	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	n/a	6oy7	POP	D	1601	e6oy7D1	cradle loop barrel	RIFT-related	double psi	RNA_pol_Rpb1_2
Q8RQE8	n/a	6oy7	POP	D	1601	e6oy7D4	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	first helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_3
Q8RQE8	n/a	6oy7	POP	D	1601	e6oy7D6	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	second helical domain in RNA-polymerase beta-prime subunit	RNA_pol_Rpb1_5,RNA_pol_Rpb1_4