(1S)-1,4-anhydro-5-[(N-carbamimidoylglycyl-N~2~-hydroxy-L-glutaminyl)amino]-5-deoxy-1-(2,4-dioxo-1,2,3,4-tetrahydropyrimidin-5-yl)-D-ribitol
Q8RQE9 — DNA-directed RNA polymerase subunit beta
ECOD Domain Annotations
ECOD domains from AlphaFold model interacting with ligand PUM
| UniProt | DrugBank | PDB Ligand | Domain Label | ECOD ID | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|
| No predicted ECOD data found | ||||||||
ECOD domains from experimental PDB structures interacting with ligand PUM
| UniProt | DrugBank | PDB ID | Ligand Acc. | Chain | Res No. | Exp. Domain | X Group | H Group | T Group | F Group |
|---|---|---|---|---|---|---|---|---|---|---|
| Q8RQE9 | n/a | 5x21 | PUM | I | 101 | e5x21C2 | cradle loop barrel | RIFT-related | double psi | RNA_pol_Rpb2_6 |
| Q8RQE9 | n/a | 5x21 | PUM | I | 101 | e5x21C3 | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | N-terminal domain in beta subunit of DNA dependent RNA-polymerase | RNA_pol_Rpb2_1,RNA_pol_Rpb2_3 |
| Q8RQE9 | n/a | 5x21 | PUM | I | 101 | e5x21C6 | barrel domain in beta subunit of DNA dependent RNA-polymerase | barrel domain in beta subunit of DNA dependent RNA-polymerase | barrel domain in beta subunit of DNA dependent RNA-polymerase | RNA_pol_Rpb2_45 |