SODIUM ION

Q8ZIE7 — D-alanine--D-alanine ligase

ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand NA

UniProt	DrugBank	PDB Ligand	Domain Label	ECOD ID	X Group	H Group	T Group	F Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand NA

UniProt	DrugBank	PDB ID	Ligand Acc.	Chain	Res No.	Exp. Domain	X Group	H Group	T Group	F Group
Q8ZIE7	n/a	4zqi	NA	A	401	e4zqiA1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	4zqi	NA	A	401	e4zqiA2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	4zqi	NA	B	402	e4zqiB2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	4zqi	NA	B	402	e4zqiC1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	4zqi	NA	C	401	e4zqiC1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	4zqi	NA	C	401	e4zqiC2	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	4zqi	NA	D	401	e4zqiD1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	4zqi	NA	D	401	e4zqiD2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bpf	NA	A	404	e5bpfA1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bpf	NA	B	402	e5bpfB1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5bpf	NA	B	402	e5bpfB2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bpf	NA	C	402	e5bpfC1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5bpf	NA	C	402	e5bpfC2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bpf	NA	D	402	e5bpfD1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bpf	NA	D	402	e5bpfD2	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5bph	NA	A	406	e5bphA1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bph	NA	A	406	e5bphB2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bph	NA	B	402	e5bphB1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5bph	NA	B	402	e5bphB2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bph	NA	C	402	e5bphC1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5bph	NA	C	402	e5bphC2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5bph	NA	D	402	e5bphD1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5bph	NA	D	402	e5bphD2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1o	NA	A	402	e5c1oA1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5c1o	NA	A	402	e5c1oA2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1o	NA	B	404	e5c1oB1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1o	NA	B	404	e5c1oC1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1o	NA	C	402	e5c1oC1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1o	NA	C	402	e5c1oC2	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5c1o	NA	D	402	e5c1oD1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1o	NA	D	402	e5c1oD2	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5c1p	NA	A	401	e5c1pA1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5c1p	NA	A	401	e5c1pA2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1p	NA	B	402	e5c1pB1	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N
Q8ZIE7	n/a	5c1p	NA	B	402	e5c1pB2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1p	NA	C	408	e5c1pC2	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1p	NA	D	404	e5c1pD1	Protein kinase/SAICAR synthase/ATP-grasp	Protein kinase/SAICAR synthase/ATP-grasp	ATP-grasp	Dala_Dala_lig_C
Q8ZIE7	n/a	5c1p	NA	D	404	e5c1pD2	Rossmann-like	Rossmann-related	PreATP-grasp domain	Dala_Dala_lig_N