PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 0HP | ~{N}-[(5-carbamimidoyl-3-phenyl-thiophen-2-yl)methyl]-2-(1~{H}-indol-6-yl)ethanamide | n/a | n/a | n/a | n/a |
| Explore | n/a | 0HT | methyl N-[(2S,3S)-3-amino-2-hydroxy-5-methylhexyl]-L-valyl-L-isoleucyl-L-phenylalaninate | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0HV | 3-[(4-nitronaphthalen-1-yl)amino]benzoic acid | Organic compounds | Benzenoids | Naphthalenes | Nitronaphthalenes |
| Explore | n/a | 0HX | pentan-3-yl 2-acetamido-2,4-dideoxy-alpha-L-threo-hex-4-enopyranosiduronic acid | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Carboxylic acid derivatives |
| Explore | n/a | 0HY | methyl (3R)-3-(7-amino-4,5-dioxo-1,4,5,6-tetrahydropyrimido[4,5-c]pyridazin-3-yl)butanoate | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0HZ | amino({3-[(3S,8aS)-1,4-dioxooctahydropyrrolo[1,2-a]pyrazin-3-yl]propyl}amino)methaniminium | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0I0 | 2-[1,5-dimethyl-2,4-bis(oxidanylidene)-6-(2-oxidanyl-6-oxidanylidene-cyclohexen-1-yl)carbonyl-quinazolin-3-yl]-N-(2-pyren-1-yloxyethyl)ethanamide | n/a | n/a | n/a | n/a |
| Explore | n/a | 0I1 | (3-fluoroazetidin-1-yl){1-[4-(4-fluorophenyl)pyrimidin-5-yl]piperidin-4-yl}methanone | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0I2 | (4~{S})-~{N}-[(5-carbamimidoyl-3-phenyl-thiophen-2-yl)methyl]oxepane-4-carboxamide | n/a | n/a | n/a | n/a |
| Explore | n/a | 0I3 | Andilesin C | Organic compounds | Organoheterocyclic compounds | Lactones | Gamma butyrolactones |
| Explore | n/a | 0I5 | N-[(3S)-1-fluoro-2-oxo-5-phenylpentan-3-yl]-N~2~-(morpholin-4-ylcarbonyl)-L-leucinamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0I6 | 4-[(2R)-2-oxidanyl-3-(3,4,5-trimethylphenyl)tellanyl-propyl]selanylbenzenesulfonamide | n/a | n/a | n/a | n/a |
| Explore | n/a | 0I7 | 3-[2-[4-[[4-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1,3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9,11-tetraen-8-yl]phenoxy]methyl]-1,2,3-triazol-1-yl]ethyl]-1,5-dimethyl-6-[(1S)-2-oxidanyl-6-oxidanylidene-cyclohex-2-en-1-yl]carbonyl-quinazoline-2,4-dione | n/a | n/a | n/a | n/a |
| Explore | n/a | 0IC | 4-[(2S)-2-oxidanyl-3-(3,4,5-trimethoxyphenyl)tellanyl-propyl]selanylbenzenesulfonamide | n/a | n/a | n/a | n/a |
| Explore | n/a | 0IE | Siphonaxanthin | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Tetraterpenoids |
| Explore | n/a | 0IF | 2-amino-6-fluorobenzonitrile | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzonitriles |
| Explore | n/a | 0IH | (2R)-2-[[2-(5-chloranylthiophen-2-yl)-4-oxidanylidene-6-[2-(1H-1,2,3,4-tetrazol-5-yl)phenyl]quinazolin-3-yl]methyl]-3-(4-chlorophenyl)propanoic acid | n/a | n/a | n/a | n/a |
| Explore | n/a | 0IM | 1-phenyl-5-(trifluoromethyl)pyrazole-4-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Pyrazoles |
| Explore | n/a | 0IN | 7-(pyridin-3-ylmethyl)quinolin-8-ol | Organic compounds | Organoheterocyclic compounds | Quinolines and derivatives | 8-hydroxyquinolines |
| Explore | n/a | 0IP | Terretonin C | n/a | n/a | n/a | n/a |
| Explore | n/a | 0IT | amino({(4S)-4-[({(3S)-3-[(benzylsulfonyl)amino]-2-oxopiperidin-1-yl}acetyl)amino]-5-oxopentyl}amino)methaniminium | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0IU | (2S)-2-[(2-amino-1,3-thiazol-4-yl)methyl]-N~1~-[(1S,2R,3R)-1-(cyclohexylmethyl)-2,3-dihydroxy-5-methylhexyl]-N~4~-[2-(d imethylamino)-2-oxoethyl]-N~4~-[(1S)-1-phenylethyl]butanediamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0IV | 2-{(3S)-3-[(benzylsulfonyl)amino]-2-oxopiperidin-1-yl}-N-{(2S)-1-[(3R)-1-carbamimidoylpiperidin-3-yl]-3-oxopropan-2-yl}acetamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0IW | Nalpha-[(4-methylpiperazin-1-yl)carbonyl]-N-[(3S)-1-phenyl-5-(phenylsulfonyl)pentan-3-yl]-L-phenylalaninamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0IZ | 3-[(2~{S},3~{R},4~{R})-4-[[(2~{S})-2-azanyl-3-methyl-butanoyl]amino]-2-carboxy-pyrrolidin-3-yl]propyl-$l^{3}-oxidanyl-bis(oxidanyl)boron | n/a | n/a | n/a | n/a |
| Explore | n/a | 0J0 | (3-exo)-8,8-dimethyl-3-(4-{[(1-methyl-2-oxo-1,2-dihydroquinolin-4-yl)oxy]methyl}-1H-1,2,3-triazol-1-yl)-8-azoniabicyclo[3.2.1]octane | Organic compounds | Organoheterocyclic compounds | Quinolines and derivatives | Hydroquinolines |
| Explore | n/a | 0J1 | (2R)-3-{[(R)-hydroxy{[(1S,2R,3S,4S,5R,6R)-2,3,4,6-tetrahydroxy-5-(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dinonanoate | Organic compounds | Lipids and lipid-like molecules | Glycerophospholipids | Glycerophosphoinositol phosphates |
| Explore | n/a | 0J2 | (3R)-3-(7-amino-4,5-dioxo-1,4,5,6-tetrahydropyrimido[4,5-c]pyridazin-3-yl)butanoic acid | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0J3 | 3-(4-methylpiperazin-1-yl)-N-(3-nitrobenzyl)-7-(trifluoromethyl)quinolin-5-amine | Organic compounds | Organoheterocyclic compounds | Diazinanes | Piperazines |
| Explore | n/a | 0J4 | (2R)-2-(7-amino-4,5-dioxo-1,4,5,6-tetrahydropyrimido[4,5-c]pyridazin-3-yl)propanoic acid | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |