PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | DB06842 | 0MO | (4R)-4-(3-butoxy-4-methoxybenzyl)imidazolidin-2-one | Organic compounds | Benzenoids | Phenol ethers | Anisoles |
| Explore | n/a | 0MP | N-((2S,3R)-1-(4-fluorophenyl)-3-hydroxy-4-((6'-neopentyl-3',4'-dihydrospiro[cyclobutane-1,2'-pyrano[2,3-b]pyridin]-4'-yl)amino)butan-2-yl)acetamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylbutylamines |
| Explore | n/a | 0MQ | [2-(cyclohexylamino)ethane-1,1-diyl]bisphosphonic acid | Organic compounds | Organic acids and derivatives | Organic phosphonic acids and derivatives | Bisphosphonates |
| Explore | n/a | 0MR | N-[4-chloranyl-5-[4-[[3-(2-methoxyphenyl)-5-methyl-1,2-oxazol-4-yl]carbonyl]piperazin-1-yl]-2-nitro-phenyl]pyridine-2-carboxamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 0MS | [4-(5-bromanyl-3-methyl-pyridin-2-yl)piperazin-1-yl]-[3-(2-chlorophenyl)-5-methyl-1,2-oxazol-4-yl]methanone | Organic compounds | Organoheterocyclic compounds | Diazinanes | Piperazines |
| Explore | n/a | 0MT | 4-[(4R)-4-(4-nitrophenyl)-6-oxidanylidene-3-phenyl-1,4-dihydropyrrolo[3,4-c]pyrazol-5-yl]benzoic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Pyrazoles |
| Explore | n/a | 0MU | (2R)-5-(acetyloxymethyl)-2-[(1R)-1-[[(5R)-5-azanyl-6-oxidanyl-6-oxidanylidene-hexanoyl]amino]-2-oxidanylidene-ethyl]-5,6-dihydro-2H-1,3-thiazine-4-carboxylic acid | n/a | n/a | n/a | n/a |
| Explore | n/a | 0MV | (3S)-3-(1H-indol-3-ylmethyl)-3,4-dihydro-1H-1,4-benzodiazepine-2,5-dione | Organic compounds | Organoheterocyclic compounds | Benzodiazepines | 1,4-benzodiazepines |
| Explore | n/a | 0MW | [2-(hexylamino)ethane-1,1-diyl]bis(phosphonic acid) | Organic compounds | Organic acids and derivatives | Organic phosphonic acids and derivatives | Bisphosphonates |
| Explore | n/a | 0MX | N-[5-(4-{[(3-chlorophenyl)sulfonyl]amino}phenyl)-1H-indazol-3-yl]furan-2-carboxamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Sulfanilides |
| Explore | n/a | 0MY | N-[4-(3-amino-1H-indazol-5-yl)phenyl]-3-chlorobenzenesulfonamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Sulfanilides |
| Explore | n/a | 0MZ | 2-{(2Z,5S)-4-hydroxy-2-[(2E)-(2-hydroxybenzylidene)hydrazinylidene]-2,5-dihydro-1,3-thiazol-5-yl}-N-[3-(trifluoromethyl)phenyl]acetamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Trifluoromethylbenzenes |
| Explore | n/a | 0N0 | (3S,5R)-N-{[9-(4-methoxybutyl)-9H-xanthen-9-yl]methyl}-5-{[(4-methylphenyl)sulfonyl]amino}piperidine-3-carboxamide | Organic compounds | Organoheterocyclic compounds | Benzopyrans | 1-benzopyrans |
| Explore | n/a | 0N1 | (4S,8E,11R)-4-[(1R)-1-hydroxy-2-{[3-(propan-2-yl)benzyl]amino}ethyl]-16-methyl-11-phenyl-6-oxa-3,12-diazabicyclo[12.3.1]octadeca-1(18),8,14,16-tetraene-2,13-dione | Organic compounds | Phenylpropanoids and polyketides | Macrolactams | n/a |
| Explore | n/a | 0N2 | (2R,4S,5R,6R)-4-amino-5-hydroxy-6-methyltetrahydro-2H-pyran-2-yl [(2R,3S,5R)-3-hydroxy-5-(5-methyl-2,4-dioxo-3,4-dihydropyrimidin-1(2H)-yl)tetrahydrofuran-2-yl]methyl dihydrogen diphosphate | Organic compounds | Nucleosides, nucleotides, and analogues | Pyrimidine nucleotides | Pyrimidine nucleotide sugars |
| Explore | n/a | 0N3 | 3-({[(dihydroxyboranyl)methyl]sulfamoyl}methyl)benzoic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0N4 | [({[4-(1H-tetrazol-5-yl)phenyl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Tetrazoles |
| Explore | n/a | 0N5 | N-{4-[(7-hydroxy-6-methoxyquinazolin-4-yl)amino]phenyl}benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 0N6 | (R)-(3-(3-cyanophenyl)-1-oxo-1-(pyrrolidin-1-yl)propan-2-yl)-1,2,3,4-tetrahydroisoquinoline-6-sulfonamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0N7 | 2-hydroxyisoquinoline-1,3(2H,4H)-dione | Organic compounds | Organoheterocyclic compounds | Isoquinolines and derivatives | 1,3-isoquinolinediones |
| Explore | n/a | 0N8 | (2Z)-4-[1-benzyl-4-(4-chlorobenzyl)piperidin-4-yl]-2-hydroxy-4-oxobut-2-enoic acid | Organic compounds | Organoheterocyclic compounds | Piperidines | Benzylpiperidines |
| Explore | n/a | 0N9 | 5-hydroxy-2-(1-methyl-1H-imidazol-4-yl)-6-oxo-1,6-dihydropyrimidine-4-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0NA | [({[6-(1H-tetrazol-5-yl)pyridin-3-yl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Pyridinesulfonamides |
| Explore | n/a | 0NB | [({[3-chloro-4-(1H-tetrazol-5-yl)phenyl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Tetrazoles |
| Explore | n/a | 0ND | [({[2-chloro-4-(1H-tetrazol-5-yl)phenyl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Tetrazoles |
| Explore | n/a | 0NE | [({[4-(1H-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Tetrazoles |
| Explore | n/a | 0NF | (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide | Organic compounds | Benzenoids | Naphthalenes | Naphthalenecarboxylic acids and derivatives |
| Explore | n/a | 0NG | ({[(chloromethyl)sulfonyl]amino}methyl)boronic acid | Organic compounds | Organic acids and derivatives | Organic sulfonic acids and derivatives | Organosulfonic acids and derivatives |
| Explore | n/a | 0NH | 1-[4-methyl-1-(methylsulfonyl)piperidin-4-yl]-1,6-dihydroimidazo[4,5-d]pyrrolo[2,3-b]pyridine | Organic compounds | Organoheterocyclic compounds | Pyrrolopyridines | n/a |
| Explore | n/a | 0NI | Aurachin D | n/a | n/a | n/a | n/a |