PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 0ND | [({[2-chloro-4-(1H-tetrazol-5-yl)phenyl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Tetrazoles |
| Explore | n/a | 0NE | [({[4-(1H-tetrazol-5-yl)-2-(trifluoromethyl)phenyl]sulfonyl}amino)methyl]boronic acid | Organic compounds | Organoheterocyclic compounds | Azoles | Tetrazoles |
| Explore | n/a | 0NF | (2S)-N-[3-(2-aminopropan-2-yl)-5-(trifluoromethyl)phenyl]-7-[(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-4-yl)oxy]-1,2,3,4-tetrahydronaphthalene-2-carboxamide | Organic compounds | Benzenoids | Naphthalenes | Naphthalenecarboxylic acids and derivatives |
| Explore | n/a | 0NG | ({[(chloromethyl)sulfonyl]amino}methyl)boronic acid | Organic compounds | Organic acids and derivatives | Organic sulfonic acids and derivatives | Organosulfonic acids and derivatives |
| Explore | n/a | 0NH | 1-[4-methyl-1-(methylsulfonyl)piperidin-4-yl]-1,6-dihydroimidazo[4,5-d]pyrrolo[2,3-b]pyridine | Organic compounds | Organoheterocyclic compounds | Pyrrolopyridines | n/a |
| Explore | n/a | 0NI | Aurachin D | n/a | n/a | n/a | n/a |
| Explore | n/a | 0NJ | 2-(2-fluorophenyl)-6-methoxy-1,3-benzothiazole | Organic compounds | Organoheterocyclic compounds | Benzothiazoles | n/a |
| Explore | n/a | 0NK | 6,7,8-trimethoxy-N-(pentan-3-yl)quinazolin-4-amine | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0NL | tert-butyl [(1R,3R)-3-(imidazo[4,5-d]pyrrolo[2,3-b]pyridin-1(6H)-yl)cyclopentyl]carbamate | Organic compounds | Organoheterocyclic compounds | Pyrrolopyridines | n/a |
| Explore | n/a | 0NM | cyanic acid | Organic compounds | Organic oxygen compounds | Organic oxoanionic compounds | Cyanates |
| Explore | n/a | 0NN | 1-benzyl-N-[3-(1'H,3H-spiro[2-benzofuran-1,4'-piperidin]-1'-yl)propyl]-D-prolinamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0NP | 2',3'-dideoxy-2'-fluoro-3'-triaza-1,2-dien-2-ium-1-yluridine | Organic compounds | Nucleosides, nucleotides, and analogues | Pyrimidine nucleosides | Pyrimidine 2',3'-dideoxyribonucleosides |
| Explore | n/a | 0NQ | N-{(1S)-3-[(5S)-5-tert-butyl-1-(3,3-dimethylbutyl)-4-hydroxy-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]-1-ethoxy-1-oxido-1,4-dihydro-2,4,1-benzodiazaphosphinin-7-yl}methanesulfonamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Sulfanilides |
| Explore | n/a | 0NR | methyl 3-(4-{[(1R,2S,3S,5S,7s)-5-aminotricyclo[3.3.1.1~3,7~]dec-2-yl]carbamoyl}benzyl)-4-oxo-1-phenyl-1,4-dihydro-1,8-naphthyridine-2-carboxylate | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Naphthyridines |
| Explore | n/a | 0NS | 2-methoxy-N-(3-methyl-2-oxo-1,2,3,4-tetrahydroquinazolin-6-yl)benzenesulfonamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0NT | [4-(imidazo[4,5-d]pyrrolo[2,3-b]pyridin-1(6H)-yl)piperidin-1-yl][(2S)-1-(propan-2-yl)pyrrolidin-2-yl]methanone | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0NU | 3-[(3R)-3-(imidazo[4,5-d]pyrrolo[2,3-b]pyridin-1(6H)-yl)piperidin-1-yl]-3-oxopropanenitrile | Organic compounds | Organoheterocyclic compounds | Pyrrolopyridines | n/a |
| Explore | n/a | 0NV | 1-(1-benzylpiperidin-4-yl)-1,6-dihydroimidazo[4,5-d]pyrrolo[2,3-b]pyridine | Organic compounds | Organoheterocyclic compounds | Piperidines | Benzylpiperidines |
| Explore | n/a | 0NW | 3-[(2S)-3-[4-(2-aminoethyl)piperidin-1-yl]-2-{[(2',4'-dichlorobiphenyl-3-yl)sulfonyl]amino}-3-oxopropyl]benzenecarboximidamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 0NX | (5-phenyl-1,2-oxazol-3-yl)methanol | Organic compounds | Benzenoids | Benzene and substituted derivatives | n/a |
| Explore | n/a | 0NY | 7,8-dimethoxy-N-[(2S)-1-(3-methyl-1H-pyrazol-5-yl)propan-2-yl]quinazolin-4-amine | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | DB02604 | 0NZ | 2-deoxy-6-O-phosphono-beta-D-glucopyranose | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbohydrates and carbohydrate conjugates |
| Explore | n/a | 0O0 | 6-(1,3-dimethyl-5-oxidanyl-pyrazol-4-yl)carbonyl-1,5-dimethyl-3-(2-methylphenyl)quinazoline-2,4-dione | n/a | n/a | n/a | n/a |
| Explore | n/a | 0O1 | 6-amino-4-{2-[(cyclopentylmethyl)amino]ethyl}-2-[(2-phenylethyl)amino]-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0O2 | guanosine 5'-(tetrahydrogen triphosphate) 3'-(trihydrogen diphosphate) | Organic compounds | Nucleosides, nucleotides, and analogues | Purine nucleotides | Purine ribonucleotides |
| Explore | n/a | 0O3 | 3-(hydroxymethyl)but-3-en-1-yl trihydrogen diphosphate | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Isoprenoid phosphates |
| Explore | n/a | 0O4 | 4-(isoquinolin-1-yl)-N-[2-(morpholin-4-yl)ethyl]benzamide | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Phenylpyridines |
| Explore | n/a | 0O5 | 4-(3-methylisoquinolin-1-yl)-N-[2-(morpholin-4-yl)ethyl]benzamide | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Phenylpyridines |
| Explore | n/a | 0O6 | (3S,6S,7S,9aS,3'S,6'S,7'S,9a'S)-N,N'-(benzene-1,4-diylbis{butane-4,1-diyl-1H-1,2,3-triazole-1,4-diyl[(S)-phenylmethanediyl]})bis[7-(hydroxymethyl)-6-{[(2S)-2-(methylamino)butanoyl]amino}-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide] | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0O7 | 8-(4-ethylphenyl)-5-methyl-2,5-dihydropyrazolo[4,3-c][2,1]benzothiazine 4,4-dioxide | Organic compounds | Organoheterocyclic compounds | Benzothiazines | n/a |