PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 0V3 | 6-amino-2-(methylamino)-4-[2-({[trans-4-(pyridin-3-ylethynyl)cyclohexyl]methyl}amino)ethyl]-1,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0V4 | (4R,5R,6R,6aS,9S,9aE,10aR)-5-hydroxy-9-(methoxymethyl)-6,10a-dimethyl-3-(propan-2-yl)-1,2,4,5,6,6a,7,8,9,10a-decahydrodicyclopenta[a,d][8]annulen-4-yl alpha-D-glucopyranoside | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Terpene glycosides |
| Explore | DB01733 | 0V5 | (2R)-2-(phosphonooxy)propanoic acid | Organic compounds | Organic acids and derivatives | Organic phosphoric acids and derivatives | Phosphate esters |
| Explore | n/a | 0V6 | (2Z,6S)-6-{3-chloro-5-[5-(prop-1-yn-1-yl)pyridin-3-yl]thiophen-2-yl}-2-imino-3,6-dimethyltetrahydropyrimidin-4(1H)-one | Organic compounds | Organoheterocyclic compounds | Thiophenes | 2,3,5-trisubstituted thiophenes |
| Explore | n/a | 0V7 | 2-[(3-fluorobenzyl)amino]ethanesulfonic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylmethylamines |
| Explore | n/a | 0V8 | 2-[(3-bromobenzyl)amino]ethanesulfonic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylmethylamines |
| Explore | n/a | 0V9 | (19R,22S)-25-amino-22-hydroxy-22-oxido-16-oxo-17,21,23-trioxa-22lambda~5~-phosphapentacosan-19-yl (9Z)-hexadec-9-enoate | Organic compounds | Lipids and lipid-like molecules | Glycerophospholipids | Glycerophosphoethanolamines |
| Explore | n/a | 0VA | N-[N-(4-amino-3,5-dichlorobenzyl)carbamimidoyl]-3-(4-methoxyphenyl)-5-methyl-1,2-thiazole-4-carboxamide | Organic compounds | Organoheterocyclic compounds | Azoles | Thiazoles |
| Explore | n/a | 0VB | N-{N-[4-(acetylamino)-3-chloro-5-methylbenzyl]carbamimidoyl}-3-(4-methoxyphenyl)-5-methyl-1,2-thiazole-4-carboxamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 0VC | 3-[(2S)-azetidin-2-ylmethoxy]-5-[(1S,2R)-2-(2-methoxyethyl)cyclopropyl]pyridine | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Ethers |
| Explore | n/a | 0VD | (3S)-3-amino-1-[4-(benzyloxy)phenyl]-4-(1H-imidazol-4-yl)butan-2-one | Organic compounds | Benzenoids | Phenol ethers | n/a |
| Explore | n/a | 0VE | 3-[8-({4-[ethyl(2-hydroxyethyl)amino]phenyl}amino)imidazo[1,2-a]pyrazin-5-yl]phenol | Organic compounds | Organoheterocyclic compounds | Imidazopyrazines | n/a |
| Explore | n/a | 0VF | 4-{[(3S)-1-{7-[(3,4-dimethoxyphenyl)amino][1,3]thiazolo[5,4-d]pyrimidin-5-yl}pyrrolidin-3-yl]carbamoyl}benzoic acid | Organic compounds | Benzenoids | Benzene and substituted derivatives | Methoxybenzenes |
| Explore | n/a | 0VG | N-{6-[(2S)-2-methylpyrrolidin-1-yl]pyridin-2-yl}-6-phenylimidazo[1,2-b]pyridazin-8-amine | Organic compounds | Organoheterocyclic compounds | Diazines | Pyridazines and derivatives |
| Explore | n/a | 0VH | 6-{[(1R,2S)-2-aminocyclohexyl]amino}-4-[(6-ethylpyridin-2-yl)amino]pyridazine-3-carboxamide | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Carboxylic acid derivatives |
| Explore | n/a | 0VI | 7-(4-bromanyl-2,6-dimethoxy-phenyl)-4,8-dimethyl-~{N},~{N}-bis[4,4,4-tris(fluoranyl)butyl]-1$l^{4},3,5,9-tetrazabicyclo[4.3.0]nona-1(6),2,4,8-tetraen-2-amine | n/a | n/a | n/a | n/a |
| Explore | n/a | 0VJ | 2-hydroxy-3-(4-methoxybenzyl)naphthalene-1,4-dione | Organic compounds | Benzenoids | Naphthalenes | Naphthoquinones |
| Explore | n/a | 0VK | 3-(5'-{[3,4-bis(hydroxymethyl)benzyl]oxy}-2'-methyl-2-propylbiphenyl-4-yl)pentan-3-ol | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 0VL | benzyl {2-[(5S)-5-hydroxy-4-oxo-6-{[2-(pyridin-4-yl)ethyl]carbamoyl}-4,5-dihydropyrimidin-2-yl]propan-2-yl}carbamate | n/a | n/a | n/a | n/a |
| Explore | n/a | 0VM | 2-[(4-{[3-(trifluoromethyl)pyridin-2-yl]oxy}phenyl)amino]-1H-benzimidazole-6-carbonitrile | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Ethers |
| Explore | n/a | 0VN | 2-[(4-tert-butylphenyl)amino]-1H-benzimidazole-6-carbonitrile | Organic compounds | Organoheterocyclic compounds | Benzimidazoles | n/a |
| Explore | n/a | 0VO | (4E,6Z)-7-(3-{[3,4-bis(hydroxymethyl)benzyl]oxy}phenyl)-3-ethylnona-4,6-dien-3-ol | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylpropanes |
| Explore | n/a | 0VP | 3-(5'-{[3,4-bis(hydroxymethyl)benzyl]oxy}-2'-ethyl-2-propylbiphenyl-4-yl)pentan-3-ol | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 0VQ | (3E,5E)-6-(3-{2-[3,4-bis(hydroxymethyl)phenyl]ethyl}phenyl)-1,1,1-trifluoro-2-(trifluoromethyl)octa-3,5-dien-2-ol | Organic compounds | Phenylpropanoids and polyketides | Stilbenes | n/a |
| Explore | n/a | 0VR | 1-(O-carboxy-phenylamino)-1-deoxy-D-ribulose-5-phosphate | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0VS | L-gamma-glutamyl-S-(3-methyl-1,4-dioxo-1,4-dihydronaphthalen-2-yl)-L-cysteinylglycine | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0VT | 6-methylhept-5-en-2-one | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbonyl compounds |
| Explore | n/a | 0VU | 4-({4-[3-(piperidin-1-ylcarbonyl)phenyl]pyrimidin-2-yl}amino)benzenesulfonamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoyl derivatives |
| Explore | n/a | 0VV | N-[(2E)-3,4-dihydroquinazolin-2(1H)-ylidene]sulfuric diamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0VW | N-(tetrahydropyrimidin-2(1H)-ylidene)sulfuric diamide | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |