PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 0VP | 3-(5'-{[3,4-bis(hydroxymethyl)benzyl]oxy}-2'-ethyl-2-propylbiphenyl-4-yl)pentan-3-ol | Organic compounds | Benzenoids | Benzene and substituted derivatives | Biphenyls and derivatives |
| Explore | n/a | 0VQ | (3E,5E)-6-(3-{2-[3,4-bis(hydroxymethyl)phenyl]ethyl}phenyl)-1,1,1-trifluoro-2-(trifluoromethyl)octa-3,5-dien-2-ol | Organic compounds | Phenylpropanoids and polyketides | Stilbenes | n/a |
| Explore | n/a | 0VR | 1-(O-carboxy-phenylamino)-1-deoxy-D-ribulose-5-phosphate | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0VS | L-gamma-glutamyl-S-(3-methyl-1,4-dioxo-1,4-dihydronaphthalen-2-yl)-L-cysteinylglycine | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0VT | 6-methylhept-5-en-2-one | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbonyl compounds |
| Explore | n/a | 0VU | 4-({4-[3-(piperidin-1-ylcarbonyl)phenyl]pyrimidin-2-yl}amino)benzenesulfonamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoyl derivatives |
| Explore | n/a | 0VV | N-[(2E)-3,4-dihydroquinazolin-2(1H)-ylidene]sulfuric diamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0VW | N-(tetrahydropyrimidin-2(1H)-ylidene)sulfuric diamide | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrimidines and pyrimidine derivatives |
| Explore | n/a | 0VX | N-[(2Z)-1,3-oxazolidin-2-ylidene]sulfuric diamide | Organic compounds | Organic acids and derivatives | Organic sulfuric acids and derivatives | n/a |
| Explore | n/a | 0VY | N'-sulfamoylpyrrolidine-1-carboximidamide | Organic compounds | Organic acids and derivatives | Organic sulfuric acids and derivatives | n/a |
| Explore | n/a | 0VZ | ethyl (2Z,4R)-2-(sulfamoylimino)-1,3-thiazolidine-4-carboxylate | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0W0 | (4R,5S,8Z)-8-(2-amino-1,3-thiazol-4-yl)-1-[3-(1,5-dihydroxy-4-oxo-1,4-dihydropyridin-2-yl)-1,2-oxazol-5-yl]-5-formyl-11,11-dimethyl-1,7-dioxo-4-(sulfoamino)-10-oxa-2,6,9-triazadodec-8-en-12-oic acid | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Carboxylic acid derivatives |
| Explore | n/a | 0W1 | 1,3-dimethyl-1H-thieno[2,3-c]pyrazole-5-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Thiophenes | Thiophene carboxylic acids and derivatives |
| Explore | n/a | 0W2 | 1-{(2S)-1-[(3R)-3-(2-chlorophenyl)-2-(2-fluorophenyl)pyrazolidin-1-yl]-1-oxopropan-2-yl}-3-[(1R,3S,5R,7R)-tricyclo[3.3.1.1~3,7~]dec-2-yl]urea | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0W3 | (4R,6S,8S,12R,14R,16Z,18R,19R,20S,21S)-19,21-dihydroxy-22-{(2S,2'R,5S,5'S)-5'-[(1R)-1-hydroxyethyl]-2,5'-dimethyloctahydro-2,2'-bifuran-5-yl}-4,6,8,12,14,18,20-heptamethyl-9,11-dioxodocos-16-enoic acid | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Terpene glycosides |
| Explore | n/a | 0W4 | ~{N}-[(2-chlorophenyl)methyl]-3-[(2-chlorophenyl)methylamino]pyrazine-2-carboxamide | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrazines |
| Explore | n/a | 0W7 | 2-[4-(morpholin-4-yl)-6-oxo-1,6-dihydropyrimidin-2-yl]-N-phenylacetamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 0W8 | 1-ethyl-1,3-dihydro-2H-benzimidazol-2-one | Organic compounds | Organoheterocyclic compounds | Benzimidazoles | n/a |
| Explore | n/a | 0WA | 4-fluoro-2-{[4-(pyridin-4-yl)-1,3-thiazol-2-yl]amino}phenol | Organic compounds | Benzenoids | Phenols | Halophenols |
| Explore | n/a | 0WB | 3-{2-[(5-fluoro-2-hydroxyphenyl)amino]-1,3-thiazol-4-yl}benzonitrile | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzonitriles |
| Explore | n/a | 0WC | (2R)-4-[1-(2-amino-5-chloropyrimidin-4-yl)-2,3-dihydro-1H-indol-6-yl]-2-(1,3-thiazol-2-yl)but-3-yn-2-ol | Organic compounds | Organic nitrogen compounds | Organonitrogen compounds | Amines |
| Explore | n/a | 0WD | [[(2R,3S,4R,5R)-5-(3-aminocarbonyl-4H-pyridin-1-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] [(2R,3S,4R,5R)-5-(6-aminopurin-9-yl)-4-oxidanyl-3-phosphonooxy-oxolan-2-yl]methyl hydrogen phosphate | Organic compounds | Nucleosides, nucleotides, and analogues | (5'->5')-dinucleotides | n/a |
| Explore | n/a | 0WE | N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Naphthyridines |
| Explore | n/a | 0WF | 1-cyclopentyl-6-[(1R)-1-(3-phenoxyazetidin-1-yl)ethyl]-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one | Organic compounds | Organoheterocyclic compounds | Pyrazolopyrimidines | Pyrazolo[3,4-d]pyrimidines |
| Explore | n/a | 0WG | 7-amino-6-(aminomethyl)-5-(2-bromophenyl)-1,3-dimethylpyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Phenylpyridines |
| Explore | n/a | 0WH | 1-[5-(4-amino-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydro-1H-indol-1-yl]-2-[3-(trifluoromethyl)phenyl]ethanone | Organic compounds | Organoheterocyclic compounds | Indoles and derivatives | Phenylacetylindoles |
| Explore | n/a | 0WK | 1,5-anhydro-6-O-phosphono-D-glucitol | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbohydrates and carbohydrate conjugates |
| Explore | n/a | 0WL | 1-cyclopentyl-6-{(1R)-1-[3-(pyrimidin-2-yl)azetidin-1-yl]ethyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one | Organic compounds | Organoheterocyclic compounds | Pyrazolopyrimidines | Pyrazolo[3,4-d]pyrimidines |
| Explore | DB08916 | 0WM | (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0WN | N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)butanamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |