PDB Ligand Accession
Browse small molecules by PDB ligand accession and use Explore to open matching proteins.
37373 molecules found
| DrugDomain Data | DrugBank ID | PDB Ligand | Ligand Name | Kingdom | Superclass | Class | Subclass |
|---|---|---|---|---|---|---|---|
| Explore | n/a | 0WE | N-methyl-N-[(3-methyl-1-benzofuran-2-yl)methyl]-3-(7-oxo-5,6,7,8-tetrahydro-1,8-naphthyridin-3-yl)propanamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Naphthyridines |
| Explore | n/a | 0WF | 1-cyclopentyl-6-[(1R)-1-(3-phenoxyazetidin-1-yl)ethyl]-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one | Organic compounds | Organoheterocyclic compounds | Pyrazolopyrimidines | Pyrazolo[3,4-d]pyrimidines |
| Explore | n/a | 0WG | 7-amino-6-(aminomethyl)-5-(2-bromophenyl)-1,3-dimethylpyrido[2,3-d]pyrimidine-2,4(1H,3H)-dione | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Phenylpyridines |
| Explore | n/a | 0WH | 1-[5-(4-amino-7-methyl-7H-pyrrolo[2,3-d]pyrimidin-5-yl)-2,3-dihydro-1H-indol-1-yl]-2-[3-(trifluoromethyl)phenyl]ethanone | Organic compounds | Organoheterocyclic compounds | Indoles and derivatives | Phenylacetylindoles |
| Explore | n/a | 0WK | 1,5-anhydro-6-O-phosphono-D-glucitol | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Carbohydrates and carbohydrate conjugates |
| Explore | n/a | 0WL | 1-cyclopentyl-6-{(1R)-1-[3-(pyrimidin-2-yl)azetidin-1-yl]ethyl}-1,5-dihydro-4H-pyrazolo[3,4-d]pyrimidin-4-one | Organic compounds | Organoheterocyclic compounds | Pyrazolopyrimidines | Pyrazolo[3,4-d]pyrimidines |
| Explore | DB08916 | 0WM | (2E)-N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)but-2-enamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0WN | N-{4-[(3-chloro-4-fluorophenyl)amino]-7-[(3S)-tetrahydrofuran-3-yloxy]quinazolin-6-yl}-4-(dimethylamino)butanamide | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0WO | (2R,4S)-2-[(R)-carboxy{[(5-methyl-3-phenyl-1,2-oxazol-4-yl)carbonyl]amino}methyl]-5,5-dimethyl-1,3-thiazolidine-4-carbo xylic acid | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0WP | 3-{[3-(2-cyanopropan-2-yl)benzoyl]amino}-2,6-difluoro-N-(3-methoxy-2H-pyrazolo[3,4-b]pyridin-5-yl)benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Anilides |
| Explore | n/a | 0WQ | Z-2-(3-bromophenyl) propanal oxime | n/a | n/a | n/a | n/a |
| Explore | n/a | 0WR | 2-[1-({2-[2-(dimethylamino)-1H-benzimidazol-1-yl]-9-methyl-6-(morpholin-4-yl)-9H-purin-8-yl}methyl)piperidin-4-yl]propan-2-ol | Organic compounds | Organoheterocyclic compounds | Imidazopyrimidines | Purines and purine derivatives |
| Explore | n/a | 0WS | 2-(1H-pyrazol-3-yl)pyridine-4-carboxylic acid | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Pyridinecarboxylic acids and derivatives |
| Explore | n/a | 0WT | (1R,5S,6s)-3-[5-chloro-6-ethyl-2-(pyrimidin-5-yloxy)-7H-pyrrolo[2,3-d]pyrimidin-4-yl]-3-azabicyclo[3.1.0]hexan-6-amine | Organic compounds | Organic oxygen compounds | Organooxygen compounds | Ethers |
| Explore | n/a | 0WU | (5S)-2-methyl-5-(prop-1-en-2-yl)cyclohex-2-en-1-one | Organic compounds | Lipids and lipid-like molecules | Prenol lipids | Monoterpenoids |
| Explore | n/a | 0WV | 2-methyl-5-(prop-1-en-2-yl)phenol | Organic compounds | Benzenoids | Benzene and substituted derivatives | Phenylpropenes |
| Explore | n/a | 0WW | 4-{2-[(cyclohexylmethyl)amino]ethyl}-2-[(thiophen-2-ylmethyl)amino]-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0WX | 4-{2-[(cyclohexylmethyl)amino]ethyl}-2-{[2-(morpholin-4-yl)ethyl]amino}-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0WY | 6-amino-4-{2-[(cyclohexylmethyl)amino]ethyl}-2-[(2-phenylethyl)amino]-3,7-dihydro-8H-imidazo[4,5-g]quinazolin-8-one | Organic compounds | Organoheterocyclic compounds | Diazanaphthalenes | Benzodiazines |
| Explore | n/a | 0X0 | 2-[(3,4-dimethoxyphenyl)-(4-methylphenyl)sulfonyl-amino]-N-(2,4-dimethylpentan-3-yl)ethanamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Toluenes |
| Explore | n/a | 0X1 | (5-hydroxy-6-methyl-4-{[(1-oxo-7-phenoxy-1,2-dihydro[1,2,4]triazolo[4,3-a]quinolin-4-yl)amino]methyl}pyridin-3-yl)methyl dihydrogen phosphate | Organic compounds | Organoheterocyclic compounds | Pyridines and derivatives | Pyridoxamines |
| Explore | n/a | 0X2 | 2,6-dichloro-N-(2-oxo-2,5-dihydropyridin-4-yl)benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0X3 | N-(3-chloro-5-fluorophenyl)-4-nitro-2,1,3-benzoxadiazol-5-amine | Organic compounds | Organoheterocyclic compounds | Benzoxadiazoles | n/a |
| Explore | n/a | 0X5 | 2,6-dichloro-N-{2-[(cyclopropylcarbonyl)amino]pyridin-4-yl}benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0X6 | 2,6-dichloro-4-cyano-N-{2-[(cyclopropylcarbonyl)amino]pyridin-4-yl}benzamide | Organic compounds | Benzenoids | Benzene and substituted derivatives | Benzoic acids and derivatives |
| Explore | n/a | 0X7 | 3-[(2-methylphenyl)methylamino]pyrazine-2-carboxamide | Organic compounds | Organoheterocyclic compounds | Diazines | Pyrazines |
| Explore | n/a | 0X8 | (~{E})-4-[8-methoxy-2,2-dimethyl-7-(3-methylbut-2-enyl)-9-oxidanyl-6-oxidanylidene-pyrano[3,2-b]xanthen-5-yl]oxybut-2-enoic acid | n/a | n/a | n/a | n/a |
| Explore | n/a | 0X9 | N~2~-sulfamoyl-L-arginine | Organic compounds | Organic acids and derivatives | Carboxylic acids and derivatives | Amino acids, peptides, and analogues |
| Explore | n/a | 0XA | (4S,8E)-4-[(1R)-2-{[2-(5-tert-butyl-1,3-oxazol-2-yl)propan-2-yl]amino}-1-hydroxyethyl]-16-methyl-6-oxa-3-azabicyclo[12.3.1]octadeca-1(18),8,14,16-tetraene-2,13-dione | Organic compounds | Phenylpropanoids and polyketides | Macrolactams | n/a |
| Explore | n/a | 0XB | N-(3-fluorophenyl)-4-nitro-2,1,3-benzoxadiazol-5-amine | Organic compounds | Organoheterocyclic compounds | Benzoxadiazoles | n/a |