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methyl [(1E,5R)-5-{(3S)-3-[(2E,4E)-2,5-dimethylocta-2,4-dienoyl]-2,4-dioxo-3,4-dihydro-2H-pyran-6-yl}hexylidene]carbamate

Q8RQE8 — DNA-directed RNA polymerase subunit beta'

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ECOD Domain Annotations

ECOD domains from AlphaFold model interacting with ligand DB08266

UniProtDrugBankPDB LigandDomain LabelECOD IDX GroupH GroupT GroupF Group
No predicted ECOD data found

ECOD domains from experimental PDB structures interacting with ligand DB08266

UniProtDrugBankPDB IDLigand Acc.ChainRes No.Exp. DomainX GroupH GroupT GroupF Group
Q8RQE8DB082663dxjNE6D1529e3dxjD11central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5
Q8RQE8DB082663dxjNE6D1529e3dxjD2cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
Q8RQE8DB082663dxjNE6D1529e3dxjD5second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8DB082663dxjNE6N1528e3dxjN1cradle loop barrelRIFT-relateddouble psiRNA_pol_Rpb1_2
Q8RQE8DB082663dxjNE6N1528e3dxjN10N-terminal domain in RNA-polymerase beta-prime subunitN-terminal domain in RNA-polymerase beta-prime subunitN-terminal domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_1
Q8RQE8DB082663dxjNE6N1528e3dxjN4second helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitsecond helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5,RNA_pol_Rpb1_4
Q8RQE8DB082663dxjNE6N1528e3dxjN9central helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitcentral helical domain in RNA-polymerase beta-prime subunitRNA_pol_Rpb1_5